@article{chaste.cpc, title = "Chaste: A test-driven approach to software development for biological modelling", author = "J Pitt-Francis, P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, AG Fletcher, GR Mirams, P Murray, JM Osborne, A Walter, SJ Chapman, A Garny, I van Leeuwen, PK Maini, B Rodríguez, SL Waters, JP Whiteley, HM Byrne and DJ Gavaghan", year = "2009", journal = "Computer Physics Communications", month = "December", number = "12", pages = "2452-2471", volume = "180", doi = "10.1016/j.cpc.2009.07.019", } @article{chaste_dtm, title = "A computational study of discrete mechanical tissue models", author = "P Pathmanathan and J Cooper and A Fletcher and G Mirams and P Murray and J Osborne and J Pitt-Francis and A Walter and S J Chapman", year = "2009", journal = "Physical Biology", number = "3", volume = "6", doi = "10.1088/1478-3975/6/3/036001", } @article{HPC, title = "Simulation of Cardiac Electrophysiology on Next-Generation High-Performance Computers", author = "Rafel Bordas, Bruno Carpentieri, Giorgio Fotia, Fabio Maggio, Ross Nobes, Joe Pitt-Francis and James Southern", year = "2009", journal = "Phil Trans Roy Soc (A)", } @article{cancerchaste1, title = "An integrative computational model for intestinal tissue renewal", author = "IMM van Leeuwen, GR Mirams, A Walter, A Fletcher, P Murray, J Osborne, S Varma, SJ Young, J Cooper, B Doyle, J Pitt-Francis, L Momtahan, P Pathmanathan, JP Whiteley, SJ Chapman, DJ Gavaghan, OE Jensen, JR King, PK Maini, SL Waters, HM Byrne", year = "2009", journal = "Cell Proliferation", keywords = "Wnt signalling, Crypt dynamics, Cell cycle, Colorectal cancer, Stem cells", doi = "10.1111/j.1365-2184.2009.00627.x", } @article{Chaste2, title = "Chaste: Incorporating a Novel Multiscale Spatial and Temporal Algorithm into a Large Scale Open Source Library", author = "Bernabeu MO, Bordas R, Pathmanathan P, Pitt-Francis J, Cooper J, Garny A, Gavaghan DJ, Rodriguez B, Southern JA, Whiteley JP", year = "2009", journal = "Phil Trans Roy Soc (A)", month = "May", number = "1895", pages = "1907-1930", volume = "367", doi = "10.1098/rsta.2008.0309", } @article{Chaste.08:Chaste, title = "Chaste: Using Agile Programming Techniques to Develop Computational Biology Software", author = "Joe Pitt-Francis, Miguel O. Bernabeu, Jonathan Cooper, Alan Garny, Lee Momtahan, James Osborne, Pras Pathmanathan, Blanca Rodriguez, Jonathan P. Whiteley, David J. Gavaghan", year = "2008", journal = "Philosophical Transactions of the Royal Society A", number = "1878", pages = "3111-3136", volume = "366", doi = "10.1098/rsta.2008.0096", }