OXFORD UNIVERSITY COMPUTING LABORATORY

Nic Smith: Publications

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[1]

Theoretical Modeling in Hemodynamics of Microcirculation

Lee J., Smith N.P.

Microcirculation, Vol. 15(8), pages 730-745. 2008.

[2]

The role of theoretical modeling in microcirculation research

Secomb T.W. et al.

Microcirculation, Vol. 15(8), pages 693-698. 2008.

[3]

Three-dimensional visualisation of cutaneous head and neck melanoma lymphoscintigraphy data

Reynolds H.M. et al.

Head and Neck, 2008.

[4]

A thermodynamic model of the cardiac sarcoplasmic/endoplasmic Ca2+ (SERCA) pump

Tran K. et al.

Biophysical Journal, 2008.

[5]

A Meta Analysis of the Physiome Paradigm with application to cardiac electrophysiology

Niederer S. A. et al.

Experimental Physiology, 2008.

[6]

Coupling Contraction, Excitation, Ventricular and Coronary Blood Flow across scale and physics in the Heart

Lee J. et al.

Phil Trans, 2008.

[7]

A Biophysically Based Model of Unitary Potential Activity in the Interstitial Cells of Cajal

R.A. Faville, A.J. Pullan, K.M Sanders, N.P. Smith

Biophys. J. 2008.

[8]

Using Physiome Standards to couple cellular functions for cardiac excitation-contraction

Terkildsen J., Niederer S.A., Hunter P.J., Crampin E.J., Smith N.P.

Exp. Physiol. 2008.

[9]

Energetic Consequences of Mechanical Loads

Loiselle D.S., Crampin E.J., Niederer S.A., Smith N.P., Barclay C.J.

Prog. Bio. Mol. Biol. 2008.

[10]

Triangulation of p-Order parametric Surfaces,

Nordsletten D.A., Smith N.P.

Journal of Scientific Computing, 2008.

[11]

Modelling the Chloride dependent bicarbonate independent acid equivalent transporter in guinea pig ventricular myoctes

Niederer S. A., Wilson D. A., Swietach P., Smith N. P., R. D. Vaughan-Jones

Biophys. J. 2008.

[12]

Knowledge capture and the responsibility: Past and present

Smith, N., Noble, D.

Prog Biophys Mol Biol, 2008.

Editorial.

[13]

An improved numerical method for strong coupling of excitation and contraction models in the heart

Niederer, S. A., Smith, N. P.

Prog Biophys Mol Biol, 2008.

Journal article.

[14]

The balance between inactivation and activation of the Na+-K+ pump underlies the triphasic accumulation of extracellular K+ during myocardial ischemia

Terkildsen, J. R., Crampin, E. J. and Smith, N. P.

Am J Physiol Heart Circ Physiol, Vol. 293, No. 5, pages H3036-45. 2007.

Journal Article United States.

[15]

Computational biology of cardiac myocytes: proposed standards for the physiome

Smith, N. P. et al.

J Exp Biol, Vol. 210, No. Pt 9, pages 1576-83. 2007.

Eb005825/eb/nibib Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't England.

[16]

Mapping melanoma lymphoscintigraphy data onto a 3D anatomically based model

Reynolds, H. M. et al.

Ann Biomed Eng, Vol. 35, No. 8, pages 1444-57. 2007.

Journal Article Research Support, Non-U.S. Gov't United States.

[17]

Three-dimensional visualisation of lymphatic drainage patterns in patients with cutaneous melanoma

Reynolds, H. M. et al.

Lancet Oncol, Vol. 8, No. 9, pages 806-12. 2007.

Evaluation Studies Journal Article Research Support, Non-U.S. Gov't England.

[18]

A mathematical model of the slow force response to stretch in rat ventricular myocytes

Niederer, S. A., Smith, N. P.

Biophys J, Vol. 92, No. 11, pages 4030-44. 2007.

R01-EB005825-01/EB/United States NIBIB Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't United States.

[19]

Automatic segmentation of 3D micro-CT coronary vascular images

Lee, J. et al.

Med Image Anal, Vol. 11, No. 6, pages 630-47. 2007.

Journal Article Netherlands.

[20]

Effects of Stenting on Blood Flow in a Coronary Artery Model, Applied Bionics

Raghu, R., Pullan, A.J. and Smith, N.P.

Applied Bionics, Vol. 3, No. 2, pages 77-86. 2006.

[21]

Structural morphology of renal vasculature

Nordsletten, D. A. et al.

Am J Physiol Heart Circ Physiol, Vol. 291, No. 1, pages H296-309. 2006.

EB000305/EB/United States NIBIB R01-EB-00582501/EB/United States NIBIB Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. United States.

[22]

A quantitative analysis of cardiac myocyte relaxation: a simulation study

Niederer, S. A., Hunter, P. J. and Smith, N. P.

Biophys J, Vol. 90, No. 5, pages 1697-722. 2006.

United Kingdom Wellcome Trust Journal Article Research Support, Non-U.S. Gov't United States.

[23]

Computational multiscale modeling in the UPS physiome project: Modeling cardiac electromechanics

Nickerson, D. et al.

Ibm Journal of Research and Development, Vol. 50, No. 6, pages 617-630. 2006.

104NJ Times Cited:0 Cited References Count:52.

[24]

Modelling slow wave activity in the small intestine

Lin, A. S. et al.

J Theor Biol, Vol. 242, No. 2, pages 356-62. 2006.

R01-DK64775/DK/United States NIDDK Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Netherlands.

[25]

Computational simulations of the human magneto- and electroenterogram

Lin, A. S. et al.

Ann Biomed Eng, Vol. 34, No. 8, pages 1322-31. 2006.

R01-DK64775/DK/United States NIDDK Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't United States.

[26]

Hodgkin-Huxley type ion channel characterization: an improved method of voltage clamp experiment parameter estimation

Lee, J., Smaill, B. and Smith, N.

J Theor Biol, Vol. 242, No. 1, pages 123-34. 2006.

Journal Article Research Support, Non-U.S. Gov't Netherlands.

[27]

Acidosis in models of cardiac ventricular myocytes

Crampin, E. J. et al.

Philos Transact A Math Phys Eng Sci, Vol. 364, No. 1842, pages 1171-86. 2006.

Journal Article Research Support, Non-U.S. Gov't Review England.

[28]

A dynamic model of excitation-contraction coupling during acidosis in cardiac ventricular myocytes

Crampin, E. J., Smith, N. P.

Biophys J, Vol. 90, No. 9, pages 3074-90. 2006.

EB005825/EB/United States NIBIB United Kingdom Wellcome Trust Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't United States.

[29]

Three-dimensional models of individual cardiac histoanatomy: tools and challenges

Burton, R. A. et al.

Ann N Y Acad Sci, Vol. 1080, pages 301-19. 2006.

HL 63195/HL/United States NHLBI Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't United States.

[30]

Computational Modeling of Ventricular Mechanics and Energetics

Smith, N.P., Stevens, C. and Hunter, P.J.

Applied Mechanics Reviews, Vol. 58, pages 77-90. 2005.

[31]

The efficiency of muscle contraction

Smith, N. P., Barclay, C. J. and Loiselle, D. S.

Prog Biophys Mol Biol, Vol. 88, No. 1, pages 1-58. 2005.

Journal Article Research Support, Non-U.S. Gov't Review England.

[32]

New developments in a strongly coupled cardiac electromechanical model

Nickerson, D., Smith, N. and Hunter, P.

Europace, Vol. 7 Suppl 2, pages 118-27. 2005.

Journal Article Research Support, Non-U.S. Gov't England European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.

[33]

Integration from proteins to organs: the IUPS Physiome Project

Hunter, P. et al.

Mech Ageing Dev, Vol. 126, No. 1, pages 187-92. 2005.

Journal Article Review Ireland.

[34]

Computational Modelling of the Heart

Smith, N.P. et al.

Acta Numerica, Vol. 13, pages 371-431. 2004.

[35]

Modelling cellular and tissue function

Smith, N. P., Crampin, E. J.

Prog Biophys Mol Biol, Vol. 85, No. 2-3, pages 117-9. 2004.

Editorial England.

[36]

Development of models of active ion transport for whole-cell modelling: cardiac sodium-potassium pump as a case study

Smith, N. P., Crampin, E. J.

Prog Biophys Mol Biol, Vol. 85, No. 2-3, pages 387-405. 2004.

Comparative Study Evaluation Studies Journal Article Research Support, Non-U.S. Gov't Validation Studies England.

[37]

A computational study of the interaction between coronary blood flow and myocardial mechanics

Smith, N. P.

Physiol Meas, Vol. 25, No. 4, pages 863-77. 2004.

Journal Article England.

[38]

Giving form to the function of the heart: embedding cellular models in an anatomical framework

Smith, N., Hunter, P.

Jpn J Physiol, Vol. 54, No. 6, pages 541-4. 2004.

Journal Article Review Japan.

[39]

Multi-scale modelling and the IUPS physiome project

Crampin, E. J., Smith, N. P. and Hunter, P. J.

J Mol Histol, Vol. 35, No. 7, pages 707-14. 2004.

Journal Article Netherlands.

[40]

Computational physiology and the Physiome Project

Crampin, E. J. et al.

Exp Physiol, Vol. 89, No. 1, pages 1-26. 2004.

Journal Article Research Support, Non-U.S. Gov't Review England.

[41]

Altered T wave dynamics in a contracting cardiac model

Smith, N. P., Buist, M. L. and Pullan, A. J.

J Cardiovasc Electrophysiol, Vol. 14, No. 10 Suppl, pages S203-9. 2003.

Journal Article Research Support, Non-U.S. Gov't United States.

[42]

From sarcomere to cell: an efficient algorithm for linking mathematical models of muscle contraction

Smith, N. P.

Bull Math Biol, Vol. 65, No. 6, pages 1141-62. 2003.

Journal Article United States.

[43]

New developments in an anatomical framework for modeling cardiac ischemia

Smith, N. et al.

International Journal of Bifurcation and Chaos, Vol. 13, No. 12, pages 3717-3722. 2003.

779UV Times Cited:1 Cited References Count:19.

[44]

Cardiac electrical activity—from heart to body surface and back again

Pullan, A. J. et al.

J Electrocardiol, Vol. 36 Suppl, pages 63-7. 2003.

Journal Article United States.

[45]

An Anatomically Based Model of Transient Coronary Blood Flow in the Heart

Smith, N.P., Pullan, A.J. and Hunter, P.J.

SIAM Journal of Applied Mathematics, Vol. 62, No. 3, pages 990-1018. 2002.

[46]

Mathematical modelling of the heart: cell to organ

Smith, N. P. et al.

Chaos Solitons & Fractals, Vol. 13, No. 8, pages 1613-1621. 2002.

517YQ Times Cited:17 Cited References Count:26.

[47]

Analysis of Coronary Blood Flow Interaction with Myocardial Mechanics Based on Anatomical Models

Smith, N.P., Kassab, G.S.

Philos Transact A Math Phys Eng Sci, Vol. 359, pages 1159-1172. 2001.

[48]

A model of cardiac cellular electromechanics

Nickerson, D. P., Smith, N. P. and Hunter, P. J.

Philosophical Transactions of the Royal Society of London Series a-Mathematical Physical and Engineering Sciences, Vol. 359, No. 1783, pages 1159-1172. 2001.

443TM Times Cited:24 Cited References Count:40.

[49]

Mathematical modelling of the ischaemic heart

Mulquiney, P. J. et al.

Nonlinear Analysis-Theory Methods & Applications, Vol. 47, No. 1, pages 235-244. 2001.

Part 1 466BX Times Cited:5 Cited References Count:18.

[50]

Generation of an anatomically based geometric coronary model

Smith, N. P., Pullan, A. J. and Hunter, P. J.

Ann Biomed Eng, Vol. 28, No. 1, pages 14-25. 2000.

Journal Article Research Support, Non-U.S. Gov't United states.

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