Joe Pitt-Francis: Publications

A computational study of discrete mechanical tissue models

P Pathmanathan et al.

Physical Biology, Vol. 6, No. 3, 2009.

Details | BibTeX | DOI (10.1088/1478-3975/6/3/036001)

An integrative computational model for intestinal tissue renewal

IMM van Leeuwen, GR Mirams, A Walter, A Fletcher, P Murray, J Osborne, S Varma, SJ Young, J Cooper, B Doyle, J Pitt-Francis, L Momtahan, P Pathmanathan, JP Whiteley, SJ Chapman, DJ Gavaghan, OE Jensen, JR King, PK Maini, SL Waters, HM Byrne

Cell Proliferation, 2009.

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Chaste: A test-driven approach to software development for biological modelling

J Pitt-Francis, P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, AG Fletcher, GR Mirams, P Murray, JM Osborne, A Walter, SJ Chapman, A Garny, I van Leeuwen, PK Maini, B Rodríguez, SL Waters, JP Whiteley, HM Byrne, DJ Gavaghan

Computer Physics Communications, Vol. (in press). 2009.

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Chaste: Incorporating a Novel Multiscale Spatial and Temporal Algorithm into a Large Scale Open Source Library

Bernabeu MO, Bordas R, Pathmanathan P, Pitt-Francis J, Cooper J, Garny A, Gavaghan DJ, Rodriguez B, Southern JA, Whiteley JP

Phil Trans Roy Soc (A), Vol. 367, No. 1895, pages 1907-1930. May 2009.

Details | BibTeX | DOI (10.1098/rsta.2008.0309)

Chaste: Using Agile Programming Techniques to Develop Computational Biology Software

J Pitt-Francis, MO Bernabeu, JC, A Garny, L Momtahan, J Osborne, P Pathmanathan, B Rodriguez, JP Whiteley, DJ Gavaghan

Philosophical Transactions of the Royal Society A, Vol. 366(1878), pages 3111-3136. 2008.

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Chaste: using agile programming techniques to develop computational biology software

Joe Pitt-Francis, Miguel O. Bernabeu, Jonathan Cooper, Alan Garny, Lee Momtahan, James Osborne, Pras Pathmanathan, Blanca Rodriguez, Jonathan P. Whiteley, David J. Gavaghan

Phil Trans Roy Soc A, Vol. 366, No. 1878, pages 3111-3136. 2008.

Details | BibTeX | DOI (10.1098/rsta.2008.0096)

Simulation of Cardiac Electrophysiology on Next-Generation High-Performance Computers

Rafel Bordas, Bruno Carpentieri, Giorgio Fotia, Fabio Maggio, Ross Nobes, Joe Pitt-Francis, James Southern

Phil Trans Roy Soc (A), 2009.

Details | BibTeX